Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_22865 | Not Available | Negative | 5212354 - 5212587 | 8541.37 |
| membrane protein insertase yidc | DW048_22880 | Not Available | Negative | 5215156 - 5217021 | 70945.9 |
| ctp synthase | DW048_22885 | Not Available | Negative | 5217061 - 5218659 | 60081.3 |
| lysm peptidoglycan-binding domain-containing protein | DW048_22890 | Not Available | Negative | 5218817 - 5219713 | 35105.5 |
| hypothetical protein | DW048_22895 | Not Available | Negative | 5219819 - 5220460 | 24576.1 |
| hypothetical protein | DW048_22900 | Not Available | Negative | 5220616 - 5221164 | 21522.5 |
| hypothetical protein | DW048_22905 | Not Available | Negative | 5221186 - 5221548 | 13745.5 |
| rna polymerase sigma factor | DW048_22910 | Not Available | Negative | 5221556 - 5222092 | 21672.0 |
| cell surface protein | DW048_22920 | Not Available | Positive | 5222985 - 5225711 | 97925.1 |
| crp/fnr family transcriptional regulator | DW048_22930 | Not Available | Positive | 5226707 - 5227270 | 22004.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

