Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | DW048_22730 | Not Available | Negative | 5191556 - 5193508 | 77911.9 |
| duf262 domain-containing protein | DW048_22735 | Not Available | Negative | 5193505 - 5195382 | 74129.6 |
| xre family transcriptional regulator | DW048_22740 | Not Available | Negative | 5195401 - 5195721 | 12000.1 |
| pantoate--beta-alanine ligase | DW048_22750 | Not Available | Negative | 5196448 - 5197296 | 31339.6 |
| glycogen synthase | DW048_22755 | Not Available | Positive | 5197648 - 5198472 | 31933.0 |
| stld/darb family beta-ketosynthase | DW048_22765 | Not Available | Positive | 5200180 - 5201322 | 42343.7 |
| hypothetical protein | DW048_22770 | Not Available | Positive | 5201402 - 5201668 | 10499.8 |
| transposase | DW048_22775 | Not Available | Positive | 5201765 - 5202046 | 10531.7 |
| hypothetical protein | DW048_22780 | Not Available | Positive | 5202346 - 5202507 | 6226.63 |
| hypothetical protein | DW048_22785 | Not Available | Positive | 5202682 - 5203323 | 24619.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

