Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_22530 | Not Available | Negative | 5157152 - 5158195 | 41669.3 |
| arac family transcriptional regulator | DW048_22540 | Not Available | Positive | 5158727 - 5158798 | 2712.15 |
| hypothetical protein | DW048_22550 | Not Available | Negative | 5161933 - 5163528 | 62507.7 |
| hypothetical protein | DW048_22555 | Not Available | Negative | 5163644 - 5163838 | 7604.32 |
| Trna-cys | Not Available | Not Available | Positive | 5163905 - 5163979 | Not Available |
| trna lysidine(34) synthetase tils | DW048_22570 | Not Available | Positive | 5166877 - 5168181 | 50139.6 |
| hypothetical protein | DW048_22575 | Not Available | Negative | 5168462 - 5168884 | 16388.9 |
| glpgli family protein | DW048_22580 | Not Available | Negative | 5168896 - 5170602 | 63445.0 |
| hypothetical protein | DW048_22590 | Not Available | Positive | 5171320 - 5171526 | 7958.76 |
| peptidase u32 | DW048_22610 | Not Available | Positive | 5175388 - 5176353 | 36679.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

