Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DW048_22460 | Not Available | Negative | 5141455 - 5142678 | 47483.2 |
| site-specific integrase | DW048_22465 | Not Available | Positive | 5143090 - 5143534 | 17399.7 |
| transposase | DW048_22470 | Not Available | Positive | 5143535 - 5143701 | 6294.52 |
| hypothetical protein | DW048_22475 | Not Available | Negative | 5143750 - 5144412 | 26114.5 |
| hypothetical protein | DW048_22485 | Not Available | Negative | 5147225 - 5147422 | 7756.73 |
| dde transposase | DW048_22495 | Not Available | Negative | 5148412 - 5148739 | 13036.8 |
| mobilization protein | DW048_22510 | Not Available | Negative | 5153750 - 5154150 | 15267.4 |
| dna primase | DW048_22515 | Not Available | Negative | 5154361 - 5155317 | 36556.1 |
| mobilization protein | DW048_22520 | Not Available | Negative | 5155530 - 5156606 | 41092.5 |
| duf3853 family protein | DW048_22525 | Not Available | Negative | 5156621 - 5156929 | 11386.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

