Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_01975 | Not Available | Negative | 441506 - 443011 | 57429.9 |
| 6-phosphofructokinase | DW048_01980 | Not Available | Positive | 443159 - 444169 | 35787.3 |
| hybrid sensor histidine kinase/response regulator | DW048_01985 | Not Available | Negative | 444179 - 448252 | 154795.0 |
| tonb-dependent receptor | DW048_01990 | Not Available | Positive | 448436 - 451690 | 121279.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_01995 | Not Available | Positive | 451711 - 453624 | 73430.1 |
| duf229 domain-containing protein | DW048_02000 | Not Available | Positive | 453726 - 455162 | 55189.7 |
| glycoside hydrolase family 29 | DW048_02005 | Not Available | Positive | 455166 - 456551 | 52612.5 |
| glycoside hydrolase family 36 | DW048_02010 | Not Available | Positive | 456558 - 458633 | 78414.8 |
| sulfatase | DW048_02015 | Not Available | Positive | 458652 - 460205 | 57831.5 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DW048_02025 | Not Available | Negative | 461278 - 462543 | 44849.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

