Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW048_22310 | Not Available | Negative | 5115573 - 5115776 | 7955.69 |
| hypothetical protein | DW048_22325 | Not Available | Positive | 5117518 - 5117766 | 9849.92 |
| hypothetical protein | DW048_22330 | Not Available | Positive | 5117796 - 5118383 | 22205.0 |
| malate dehydrogenase | DW048_22340 | Not Available | Positive | 5118927 - 5119928 | 36087.5 |
| dna primase | DW048_22345 | Not Available | Positive | 5120006 - 5122081 | 78742.5 |
| aspartate kinase | DW048_22360 | Not Available | Positive | 5126005 - 5127351 | 50760.7 |
| duf4422 domain-containing protein | DW048_22370 | Not Available | Positive | 5128457 - 5129236 | 31050.7 |
| udp-galactopyranose mutase | DW048_22375 | Not Available | Positive | 5129274 - 5130419 | 44334.9 |
| nad(p)-dependent oxidoreductase | DW048_22380 | Not Available | Positive | 5130470 - 5131483 | 37998.9 |
| hypothetical protein | DW048_22385 | Not Available | Positive | 5131480 - 5132289 | 31117.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

