Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3990 domain-containing protein | DW048_22020 | Not Available | Positive | 5066776 - 5067258 | 18460.3 |
| hypothetical protein | DW048_22030 | Not Available | Positive | 5068249 - 5068728 | 18282.5 |
| hypothetical protein | DW048_22035 | Not Available | Positive | 5068785 - 5069048 | 10334.2 |
| sam-dependent dna methyltransferase | DW048_22040 | Not Available | Positive | 5069064 - 5069789 | 27690.7 |
| hypothetical protein | DW048_22045 | Not Available | Positive | 5069819 - 5070142 | 12496.2 |
| hypothetical protein | DW048_22050 | Not Available | Positive | 5070142 - 5070495 | 13675.7 |
| hypothetical protein | DW048_22055 | Not Available | Positive | 5070755 - 5070967 | 8029.99 |
| hypothetical protein | DW048_22060 | Not Available | Negative | 5070964 - 5071176 | 7818.59 |
| phosphoribosyltransferase | DW048_22065 | Not Available | Positive | 5071306 - 5071872 | 21879.6 |
| duf1273 family protein | DW048_22070 | Not Available | Positive | 5071874 - 5072488 | 23976.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

