Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW048_21910 | Not Available | Positive | 5042246 - 5042749 | 18871.8 |
| glycosyltransferase family 1 protein | DW048_21915 | Not Available | Positive | 5043070 - 5044191 | 42214.6 |
| hypothetical protein | DW048_21920 | Not Available | Positive | 5044197 - 5044651 | 17490.9 |
| tagaturonate reductase | DW048_21925 | Not Available | Negative | 5044844 - 5046283 | 53907.1 |
| uronate isomerase | DW048_21930 | Not Available | Positive | 5046609 - 5048015 | 54309.7 |
| tlpa family protein disulfide reductase | DW048_21935 | Not Available | Negative | 5048104 - 5049303 | 46104.1 |
| winged helix family transcriptional regulator | DW048_21940 | Not Available | Positive | 5049485 - 5050447 | 37634.8 |
| mbl fold metallo-hydrolase | DW048_21945 | Not Available | Positive | 5050600 - 5051403 | 29900.9 |
| Trna-lys | Not Available | Not Available | Positive | 5051492 - 5051567 | Not Available |
| xre family transcriptional regulator | DW048_21955 | Not Available | Positive | 5052122 - 5052574 | 17319.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

