Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_01915 | Not Available | Positive | 423361 - 423645 | 9742.6 |
| duf4221 domain-containing protein | DW048_01920 | Not Available | Positive | 423718 - 424902 | 46005.8 |
| duf2062 domain-containing protein | DW048_01925 | Not Available | Positive | 425024 - 426217 | 44762.8 |
| methyltransferase domain-containing protein | DW048_01930 | Not Available | Positive | 426210 - 430064 | 146493.0 |
| phenylacetate--coa ligase family protein | DW048_01945 | Not Available | Positive | 433203 - 434498 | 49526.5 |
| hypothetical protein | DW048_01950 | Not Available | Positive | 434549 - 435124 | 21501.1 |
| pas domain-containing protein | DW048_01955 | Not Available | Negative | 435242 - 437665 | 92953.8 |
| hypothetical protein | DW048_01960 | Not Available | Positive | 437864 - 438685 | 30751.9 |
| duf3108 domain-containing protein | DW048_01965 | Not Available | Negative | 438773 - 439582 | 31356.0 |
| hypothetical protein | DW048_01970 | Not Available | Negative | 439579 - 441501 | 73414.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

