Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3127 domain-containing protein | DW048_21635 | Not Available | Negative | 4973006 - 4973383 | 13929.4 |
| dna polymerase iii subunit beta | DW048_21640 | Not Available | Positive | 4973537 - 4974661 | 41323.5 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DW048_21660 | Not Available | Positive | 4978522 - 4979289 | 28137.2 |
| tetratricopeptide repeat protein | DW048_21665 | Not Available | Positive | 4979326 - 4981026 | 62554.2 |
| upxy family transcription antiterminator | DW048_21670 | Not Available | Negative | 4981264 - 4981842 | 22227.4 |
| hypothetical protein | DW048_21680 | Not Available | Positive | 4984460 - 4985800 | 49546.1 |
| hypothetical protein | DW048_21685 | Not Available | Positive | 4985813 - 4987486 | 62447.6 |
| hypothetical protein | DW048_21690 | Not Available | Positive | 4987497 - 4987901 | 15340.4 |
| hypothetical protein | DW048_21695 | Not Available | Positive | 4988115 - 4988651 | 19892.6 |
| sgnh/gdsl hydrolase family protein | DW048_21710 | Not Available | Negative | 4991448 - 4992299 | 32564.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

