Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein | DW048_21585 | Not Available | Negative | 4967797 - 4968801 | 39162.5 |
| hypothetical protein | DW048_21590 | Not Available | Negative | 4968752 - 4968937 | 7198.52 |
| hypothetical protein | DW048_21595 | Not Available | Positive | 4969402 - 4969653 | 9466.3 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DW048_21600 | Not Available | Positive | 4969650 - 4969925 | 10689.9 |
| hypothetical protein | DW048_21605 | Not Available | Positive | 4969936 - 4970133 | 7528.7 |
| hypothetical protein | DW048_21610 | Not Available | Positive | 4970327 - 4970626 | 11797.2 |
| mobilization protein | DW048_21615 | Not Available | Positive | 4970623 - 4971417 | 29457.8 |
| hypothetical protein | DW048_21620 | Not Available | Positive | 4971374 - 4971826 | 17523.8 |
| charged multivesicular body protein 2b-b | DW048_21625 | Not Available | Positive | 4971845 - 4972075 | 8379.17 |
| replication initiation protein | DW048_21630 | Not Available | Negative | 4972114 - 4972919 | 31287.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

