Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW048_21535 | Not Available | Negative | 4963526 - 4963837 | 12144.8 |
| replication initiation protein | DW048_21540 | Not Available | Negative | 4964298 - 4964484 | 7298.92 |
| hypothetical protein | DW048_21545 | Not Available | Negative | 4964435 - 4964620 | 7198.52 |
| hypothetical protein | DW048_21550 | Not Available | Positive | 4965085 - 4965336 | 9466.3 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DW048_21555 | Not Available | Positive | 4965333 - 4965608 | 10689.9 |
| hypothetical protein | DW048_21560 | Not Available | Positive | 4965619 - 4965816 | 7528.7 |
| hypothetical protein | DW048_21565 | Not Available | Positive | 4966010 - 4966309 | 11797.2 |
| mobilization protein | DW048_21570 | Not Available | Positive | 4966306 - 4967100 | 29457.8 |
| hypothetical protein | DW048_21575 | Not Available | Positive | 4967057 - 4967509 | 17523.8 |
| charged multivesicular body protein 2b-b | DW048_21580 | Not Available | Positive | 4967528 - 4967758 | 8379.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

