Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW048_21475 | Not Available | Positive | 4944544 - 4945287 | 28391.3 |
| glycosyltransferase family 4 protein | DW048_21480 | Not Available | Positive | 4945303 - 4946493 | 45895.9 |
| amino acid adenylation domain-containing protein | DW048_21485 | Not Available | Positive | 4946812 - 4950909 | 156532.0 |
| tonb-dependent receptor | DW048_21495 | Not Available | Positive | 4951539 - 4953911 | 90542.5 |
| hypothetical protein | DW048_21500 | Not Available | Positive | 4953958 - 4955139 | 44155.1 |
| tonb-dependent receptor | DW048_21510 | Not Available | Positive | 4955615 - 4958737 | 115538.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_21515 | Not Available | Positive | 4958746 - 4960689 | 72714.1 |
| hypothetical protein | DW048_21520 | Not Available | Positive | 4960708 - 4961184 | 17348.6 |
| gfo/idh/moca family oxidoreductase | DW048_21525 | Not Available | Positive | 4961295 - 4962698 | 53371.0 |
| dna-binding protein | DW048_21530 | Not Available | Negative | 4963160 - 4963483 | 12557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

