Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DW048_21420 | Not Available | Positive | 4932935 - 4933462 | 20772.7 |
| yitt family protein | DW048_21425 | Not Available | Negative | 4933561 - 4934457 | 33215.4 |
| leucine--trna ligase | DW048_21430 | Not Available | Negative | 4934539 - 4937373 | 108279.0 |
| hypothetical protein | DW048_21440 | Not Available | Positive | 4937595 - 4937814 | 8707.98 |
| glycosyltransferase | DW048_21445 | Not Available | Positive | 4937890 - 4939122 | 47087.6 |
| hypothetical protein | DW048_21450 | Not Available | Positive | 4939129 - 4939956 | 32421.5 |
| ndp-hexose 2,3-dehydratase | DW048_21455 | Not Available | Positive | 4939950 - 4941371 | 54959.8 |
| gfo/idh/moca family oxidoreductase | DW048_21460 | Not Available | Positive | 4941382 - 4942350 | 36357.7 |
| nad(p)-dependent oxidoreductase | DW048_21465 | Not Available | Positive | 4942359 - 4943240 | 33856.6 |
| hypothetical protein | DW048_21470 | Not Available | Positive | 4943309 - 4944547 | 47162.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

