Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DW048_21285 | Not Available | Positive | 4904216 - 4904854 | 23121.2 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DW048_21290 | Not Available | Positive | 4904879 - 4905475 | 21276.9 |
| atp-dependent helicase | DW048_21300 | Not Available | Positive | 4906858 - 4908177 | 49651.0 |
| transposase family protein | DW048_21305 | Not Available | Negative | 4908278 - 4908444 | 6469.75 |
| Trna-phe | Not Available | Not Available | Positive | 4908655 - 4908727 | Not Available |
| tetraacyldisaccharide 4'-kinase | DW048_21325 | Not Available | Negative | 4910658 - 4911758 | 42294.7 |
| nitroreductase family protein | DW048_21335 | Not Available | Positive | 4913681 - 4914286 | 23200.8 |
| bifunctional fucokinase/l-fucose-1-p-guanylyltransferase | DW048_21340 | Not Available | Positive | 4914360 - 4917200 | 105241.0 |
| glycerate kinase | DW048_21345 | Not Available | Negative | 4917187 - 4918326 | 39781.6 |
| hypothetical protein | DW048_21350 | Not Available | Negative | 4918351 - 4918645 | 11496.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

