Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DW048_21215 | Not Available | Positive | 4888956 - 4890176 | 44929.0 |
| fimbrillin family protein | DW048_21220 | Not Available | Positive | 4890294 - 4891256 | 35121.2 |
| hypothetical protein | DW048_21225 | Not Available | Positive | 4891282 - 4892553 | 46877.0 |
| ph domain-containing protein | DW048_21240 | Not Available | Negative | 4896676 - 4897119 | 16664.8 |
| hypothetical protein | DW048_21245 | Not Available | Negative | 4897288 - 4897479 | 7664.46 |
| hypothetical protein | DW048_21250 | Not Available | Positive | 4897567 - 4897886 | 12022.5 |
| hypothetical protein | DW048_21260 | Not Available | Negative | 4899148 - 4899351 | 7631.28 |
| hypothetical protein | DW048_21265 | Not Available | Positive | 4899882 - 4900682 | 30784.6 |
| na(+)-translocating nadh-quinone reductase subunit a | DW048_21270 | Not Available | Positive | 4900924 - 4902273 | 49524.8 |
| na(+)-translocating nadh-quinone reductase subunit c | DW048_21280 | Not Available | Positive | 4903523 - 4904197 | 24676.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

