Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase recq | DW048_21160 | Not Available | Negative | 4873352 - 4875169 | 69158.0 |
| glycosyltransferase family 2 protein | DW048_21165 | Not Available | Positive | 4875441 - 4876430 | 38644.7 |
| lta synthase family protein | DW048_21170 | Not Available | Positive | 4876609 - 4878636 | 77422.9 |
| glycosyltransferase | DW048_21175 | Not Available | Negative | 4878667 - 4879614 | 36580.4 |
| gtra family protein | DW048_21180 | Not Available | Negative | 4879651 - 4880025 | 14231.0 |
| glycosyltransferase family 39 protein | DW048_21185 | Not Available | Positive | 4880112 - 4881836 | 65330.9 |
| alkaline phosphatase family protein | DW048_21190 | Not Available | Negative | 4881920 - 4883746 | 68052.1 |
| ribonuclease h | DW048_21195 | Not Available | Negative | 4883762 - 4884388 | 23847.5 |
| arginine--trna ligase | DW048_21200 | Not Available | Negative | 4884389 - 4886209 | 68001.7 |
| duf5119 domain-containing protein | DW048_21210 | Not Available | Positive | 4887931 - 4888935 | 38357.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

