Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_01865 | Not Available | Negative | 412539 - 412733 | 7395.84 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW048_01870 | Not Available | Negative | 412855 - 414150 | 48853.3 |
| peptidase domain-containing abc transporter | DW048_01875 | Not Available | Negative | 414160 - 416346 | 82484.1 |
| hypothetical protein | DW048_01880 | Not Available | Negative | 416315 - 416869 | 20858.7 |
| hypothetical protein | DW048_01885 | Not Available | Negative | 417406 - 418920 | 57670.0 |
| duf3244 domain-containing protein | DW048_01890 | Not Available | Negative | 418936 - 419328 | 14673.7 |
| tetratricopeptide repeat protein | DW048_01895 | Not Available | Negative | 419420 - 420934 | 59997.5 |
| outer membrane lipoprotein carrier protein lola | DW048_01900 | Not Available | Positive | 421718 - 422353 | 24689.3 |
| hypothetical protein | DW048_01905 | Not Available | Positive | 422328 - 422870 | 20818.8 |
| hydroxymyristoyl-acp dehydratase | DW048_01910 | Not Available | Positive | 422872 - 423252 | 14362.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

