Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DW048_21040 | Not Available | Positive | 4839352 - 4839892 | 21167.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_21050 | Not Available | Negative | 4840568 - 4842265 | 64162.2 |
| susc/raga family tonb-linked outer membrane protein | DW048_21055 | Not Available | Negative | 4842294 - 4845143 | 106744.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_21060 | Not Available | Negative | 4845184 - 4847160 | 74944.3 |
| tonb-dependent receptor | DW048_21065 | Not Available | Negative | 4847179 - 4850361 | 118549.0 |
| insulinase family protein | DW048_21080 | Not Available | Negative | 4854414 - 4855634 | 46505.2 |
| tigr00730 family rossman fold protein | DW048_21085 | Not Available | Positive | 4855736 - 4856272 | 19896.1 |
| sis domain-containing protein | DW048_21090 | Not Available | Positive | 4856290 - 4856892 | 21797.5 |
| carbohydrate kinase | DW048_21095 | Not Available | Positive | 4857003 - 4857923 | 34622.3 |
| aminopeptidase | DW048_21105 | Not Available | Negative | 4859010 - 4861532 | 97379.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

