Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_20980 | Not Available | Positive | 4830672 - 4831145 | 18360.6 |
| mgmt family protein | DW048_20985 | Not Available | Negative | 4831095 - 4831448 | 13260.9 |
| nitrous oxide-stimulated promoter family protein | DW048_20990 | Not Available | Negative | 4831454 - 4831747 | 11933.8 |
| gnat family n-acetyltransferase | DW048_21000 | Not Available | Negative | 4832499 - 4833440 | 36101.8 |
| sdr family oxidoreductase | DW048_21005 | Not Available | Negative | 4833483 - 4834358 | 33009.2 |
| gtra family protein | DW048_21010 | Not Available | Negative | 4834375 - 4834764 | 14940.8 |
| hsp20/alpha crystallin family protein | DW048_21015 | Not Available | Negative | 4835158 - 4835595 | 16920.9 |
| zn-dependent alcohol dehydrogenase | DW048_21020 | Not Available | Positive | 4835925 - 4836971 | 38404.4 |
| rna methyltransferase | DW048_21025 | Not Available | Positive | 4837007 - 4837813 | 29047.5 |
| hypothetical protein | DW048_21030 | Not Available | Positive | 4837827 - 4838015 | 7343.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

