Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DW048_20755 | Not Available | Positive | 4783665 - 4784660 | 37301.4 |
| hypothetical protein | DW048_20760 | Not Available | Positive | 4784657 - 4785973 | 47507.9 |
| hypothetical protein | DW048_20785 | Not Available | Negative | 4791611 - 4791838 | 8306.03 |
| site-specific integrase | DW048_20790 | Not Available | Negative | 4791856 - 4793088 | 47008.0 |
| dead/deah box helicase | DW048_20795 | Not Available | Negative | 4793385 - 4794689 | 48294.5 |
| endonuclease/exonuclease/phosphatase family protein | DW048_20815 | Not Available | Negative | 4798132 - 4799070 | 34990.7 |
| cysteine synthase a | DW048_20820 | Not Available | Positive | 4799216 - 4800166 | 33551.6 |
| trna 2-thiouridine(34) synthase mnma | DW048_20825 | Not Available | Positive | 4800173 - 4801237 | 39768.7 |
| dna-binding response regulator | DW048_20830 | Not Available | Negative | 4801234 - 4801884 | 24599.1 |
| Trna-val | Not Available | Not Available | Positive | 4801953 - 4802030 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

