Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5131 family protein | DW048_20625 | Not Available | Positive | 4755508 - 4756275 | 29868.6 |
| sensor protein kdpd | DW048_20630 | Not Available | Positive | 4756455 - 4757582 | 42638.1 |
| methyltransferase | DW048_20640 | Not Available | Negative | 4759134 - 4759802 | 24548.2 |
| dna recombination protein rmuc | DW048_20645 | Not Available | Negative | 4759820 - 4761055 | 46960.8 |
| cof-type had-iib family hydrolase | DW048_20650 | Not Available | Positive | 4761151 - 4761957 | 30316.9 |
| ferredoxin | DW048_20655 | Not Available | Negative | 4761947 - 4762477 | 19120.2 |
| duf2075 domain-containing protein | DW048_20660 | Not Available | Negative | 4762758 - 4764176 | 53922.6 |
| hypothetical protein | DW048_20665 | Not Available | Positive | 4764274 - 4764960 | 25516.8 |
| duf3822 family protein | DW048_20670 | Not Available | Positive | 4764963 - 4765787 | 32356.9 |
| methyltransferase domain-containing protein | DW048_20675 | Not Available | Positive | 4765778 - 4766338 | 21359.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

