Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | DW048_20555 | Not Available | Negative | 4738462 - 4741029 | 96391.0 |
| molecular chaperone htpg | DW048_20565 | Not Available | Positive | 4744044 - 4746089 | 78100.1 |
| Trna-arg | Not Available | Not Available | Positive | 4748616 - 4748692 | Not Available |
| transposase | DW048_20580 | Not Available | Negative | 4748837 - 4749003 | 6294.52 |
| class a beta-lactamase, subclass a2 | DW048_20590 | Not Available | Positive | 4750040 - 4750999 | 36138.6 |
| n-acetyltransferase | DW048_20595 | Not Available | Positive | 4751054 - 4751509 | 17405.2 |
| class i sam-dependent methyltransferase | DW048_20600 | Not Available | Positive | 4751781 - 4752569 | 29737.3 |
| arac family transcriptional regulator | DW048_20610 | Not Available | Positive | 4752908 - 4753849 | 36805.5 |
| pyridoxamine 5'-phosphate oxidase | DW048_20615 | Not Available | Positive | 4753941 - 4754360 | 16248.4 |
| nudix hydrolase | DW048_20620 | Not Available | Negative | 4754748 - 4755302 | 21466.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

