Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_20495 | Not Available | Positive | 4720030 - 4720677 | 24765.8 |
| glycosyl hydrolase family 43 | DW048_20510 | Not Available | Negative | 4726306 - 4729674 | 128506.0 |
| hypothetical protein | DW048_20515 | Not Available | Negative | 4729680 - 4729946 | 10451.9 |
| helix-turn-helix domain-containing protein | DW048_20520 | Not Available | Negative | 4729946 - 4732690 | 104549.0 |
| hypothetical protein | DW048_20525 | Not Available | Negative | 4732919 - 4733239 | 12341.0 |
| endo-polygalacturonase | DW048_20530 | Not Available | Negative | 4733501 - 4734937 | 53636.3 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_20535 | Not Available | Negative | 4735136 - 4735234 | 3882.7 |
| dna-binding protein | DW048_20540 | Not Available | Positive | 4735544 - 4735813 | 9982.98 |
| universal stress protein | DW048_20545 | Not Available | Positive | 4735889 - 4737016 | 43139.9 |
| hypothetical protein | DW048_20550 | Not Available | Negative | 4737214 - 4738431 | 45948.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

