Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | DW048_20425 | Not Available | Positive | 4690544 - 4690617 | 2806.53 |
| hypothetical protein | DW048_20435 | Not Available | Positive | 4693246 - 4694847 | 60326.0 |
| sigma-70 family rna polymerase sigma factor | DW048_20450 | Not Available | Positive | 4700846 - 4701361 | 20705.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_20460 | Not Available | Positive | 4704753 - 4706747 | 74062.6 |
| susc/raga family tonb-linked outer membrane protein | DW048_20465 | Not Available | Positive | 4707022 - 4710414 | 124382.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW048_20470 | Not Available | Positive | 4710450 - 4712309 | 70276.5 |
| aaa family atpase | DW048_20475 | Not Available | Positive | 4712537 - 4713730 | 45804.3 |
| susc/raga family tonb-linked outer membrane protein | DW048_20480 | Not Available | Positive | 4713925 - 4717209 | 121434.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_20485 | Not Available | Positive | 4717222 - 4719207 | 76453.4 |
| hypothetical protein | DW048_20490 | Not Available | Positive | 4719220 - 4719945 | 26605.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

