Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DW048_01805 | Not Available | Positive | 400217 - 401101 | 34477.0 |
| methyltransferase domain-containing protein | DW048_01810 | Not Available | Positive | 401115 - 402185 | 40627.8 |
| hydroxymyristoyl-acp dehydratase | DW048_01815 | Not Available | Positive | 402182 - 402619 | 16453.2 |
| acyl-coa thioesterase | DW048_01820 | Not Available | Positive | 402616 - 403059 | 17355.7 |
| beta-acp synthase | DW048_01825 | Not Available | Positive | 403044 - 404774 | 63668.1 |
| acyl carrier protein | DW048_01830 | Not Available | Positive | 404780 - 405037 | 9574.45 |
| hypothetical | DW048_01835 | Not Available | Positive | 405034 - 406223 | 41405.2 |
| polysaccharide deacetylase family protein | DW048_01850 | Not Available | Positive | 408197 - 408886 | 26432.9 |
| hypothetical protein | DW048_01855 | Not Available | Negative | 408917 - 411526 | 99885.6 |
| glpgli family protein | DW048_01860 | Not Available | Negative | 411531 - 412340 | 31910.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

