Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-c crispr-associated protein cas7/csd2 | DW048_20250 | Not Available | Positive | 4653272 - 4654156 | 32507.9 |
| crispr-associated protein cas4 | DW048_20255 | Not Available | Positive | 4654166 - 4654831 | 25837.0 |
| type i-c crispr-associated endonuclease cas1 | DW048_20260 | Not Available | Positive | 4654828 - 4655850 | 38708.3 |
| crispr-associated endonuclease cas2 | DW048_20265 | Not Available | Positive | 4655860 - 4656150 | 11015.4 |
| peptidylprolyl isomerase | DW048_20275 | Not Available | Positive | 4656607 - 4657185 | 21017.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_20280 | Not Available | Negative | 4657333 - 4658775 | 54928.9 |
| susc/raga family tonb-linked outer membrane protein | DW048_20285 | Not Available | Negative | 4658788 - 4662069 | 123205.0 |
| tlpa family protein disulfide reductase | DW048_20290 | Not Available | Negative | 4662099 - 4663439 | 51123.7 |
| putative dna modification/repair radical sam protein | DW048_20295 | Not Available | Positive | 4663797 - 4665065 | 48564.8 |
| dna metabolism protein | DW048_20300 | Not Available | Positive | 4665062 - 4665829 | 30614.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

