Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 4638669 - 4638739 | Not Available |
| transposase family protein | DW048_20190 | Not Available | Positive | 4638915 - 4639081 | 6455.68 |
| transketolase | DW048_20195 | Not Available | Positive | 4639203 - 4640048 | 31469.7 |
| transketolase family protein | DW048_20200 | Not Available | Positive | 4640038 - 4640976 | 33625.6 |
| glycerol kinase glpk | DW048_20205 | Not Available | Positive | 4641002 - 4642498 | 55221.4 |
| fucose isomerase | DW048_20210 | Not Available | Positive | 4642532 - 4643956 | 52346.9 |
| multidrug dmt transporter permease | DW048_20215 | Not Available | Positive | 4643969 - 4644985 | 35979.8 |
| sugar abc transporter substrate-binding protein | DW048_20220 | Not Available | Positive | 4644993 - 4645841 | 31277.0 |
| hypothetical protein | DW048_20235 | Not Available | Positive | 4649999 - 4650859 | 33244.5 |
| type i-c crispr-associated protein cas5 | DW048_20240 | Not Available | Positive | 4650861 - 4651541 | 26815.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

