Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_20000 | Not Available | Positive | 4599502 - 4599792 | 11063.8 |
| conjugative transposon protein tram | DW048_20010 | Not Available | Positive | 4600624 - 4601028 | 14173.2 |
| conjugative transposon protein tran | DW048_20015 | Not Available | Positive | 4601033 - 4601932 | 34048.7 |
| duf3872 domain-containing protein | DW048_20025 | Not Available | Positive | 4602548 - 4603012 | 17994.2 |
| hypothetical protein | DW048_20030 | Not Available | Negative | 4603324 - 4606440 | 118208.0 |
| duf1273 family protein | DW048_20035 | Not Available | Negative | 4606886 - 4607347 | 17406.2 |
| hypothetical protein | DW048_20040 | Not Available | Negative | 4607651 - 4607845 | 7069.69 |
| hypothetical protein | DW048_20045 | Not Available | Negative | 4607895 - 4608197 | 11667.7 |
| hypothetical protein | DW048_20050 | Not Available | Negative | 4608208 - 4608450 | 9070.03 |
| single-stranded dna-binding protein | DW048_20055 | Not Available | Negative | 4608857 - 4609234 | 14255.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

