Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | DW048_19940 | Not Available | Positive | 4590747 - 4591175 | 16125.2 |
| hypothetical protein | DW048_19945 | Not Available | Positive | 4591179 - 4592090 | 33500.4 |
| hypothetical protein | DW048_19950 | Not Available | Positive | 4592416 - 4592871 | 17375.7 |
| hypothetical protein | DW048_19955 | Not Available | Positive | 4592893 - 4593321 | 17087.9 |
| duf4134 domain-containing protein | DW048_19960 | Not Available | Positive | 4593586 - 4593885 | 10308.8 |
| duf4133 domain-containing protein | DW048_19965 | Not Available | Positive | 4593909 - 4594229 | 12040.1 |
| duf3875 domain-containing protein | DW048_19970 | Not Available | Positive | 4594233 - 4594403 | 6093.28 |
| hypothetical protein | DW048_19980 | Not Available | Positive | 4596891 - 4597166 | 10205.0 |
| duf4141 domain-containing protein | DW048_19985 | Not Available | Positive | 4597197 - 4597799 | 22673.9 |
| conjugative transposon protein traj | DW048_19990 | Not Available | Positive | 4597827 - 4598840 | 37509.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

