Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix domain-containing protein | DW048_19875 | Not Available | Positive | 4580510 - 4581412 | 35330.7 |
| alkaline phosphatase | DW048_19880 | Not Available | Negative | 4581409 - 4582809 | 50898.2 |
| hypothetical protein | DW048_19885 | Not Available | Positive | 4582919 - 4583113 | 7558.57 |
| hypothetical protein | DW048_19890 | Not Available | Positive | 4583130 - 4583630 | 19273.6 |
| abc transporter | DW048_19900 | Not Available | Positive | 4584229 - 4584818 | 23103.0 |
| hypothetical protein | DW048_19905 | Not Available | Positive | 4584893 - 4585303 | 15615.9 |
| mobilization protein | DW048_19915 | Not Available | Negative | 4587479 - 4588663 | 45431.7 |
| hypothetical protein | DW048_19920 | Not Available | Negative | 4588800 - 4589045 | 9952.03 |
| conjugal transfer protein | DW048_19930 | Not Available | Positive | 4590130 - 4590270 | 5211.46 |
| para family protein | DW048_19935 | Not Available | Positive | 4590307 - 4590744 | 16200.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

