Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | DW048_01730 | Not Available | Positive | 371523 - 372578 | 40129.7 |
| arylsulfatase | DW048_01735 | Not Available | Positive | 372726 - 374288 | 57696.3 |
| alpha-l-arabinofuranosidase | DW048_01740 | Not Available | Negative | 375089 - 377068 | 75354.2 |
| arabinan endo-1,5-alpha-l-arabinosidase | DW048_01745 | Not Available | Negative | 377092 - 378627 | 57639.9 |
| response regulator | DW048_01750 | Not Available | Positive | 378907 - 383133 | 161175.0 |
| tonb-dependent receptor | DW048_01760 | Not Available | Positive | 385632 - 388841 | 118845.0 |
| cysteine--trna ligase | DW048_01780 | Not Available | Positive | 394744 - 396225 | 56338.1 |
| 3-oxoacyl-acp reductase fabg | DW048_01790 | Not Available | Positive | 397979 - 398707 | 26439.8 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DW048_01795 | Not Available | Positive | 398715 - 399944 | 44205.5 |
| acyl carrier protein | DW048_01800 | Not Available | Positive | 399966 - 400217 | 9584.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

