Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upxy family transcription antiterminator | DW048_19610 | Not Available | Negative | 4503444 - 4503992 | 21037.2 |
| hypothetical protein | DW048_19620 | Not Available | Negative | 4504404 - 4504808 | 16094.8 |
| aaa family atpase | DW048_19625 | Not Available | Negative | 4505556 - 4507118 | 60445.6 |
| pas domain-containing protein | DW048_19630 | Not Available | Negative | 4507366 - 4508661 | 49040.2 |
| sigma-54-dependent fis family transcriptional regulator | DW048_19635 | Not Available | Negative | 4508684 - 4510039 | 50750.6 |
| tolc family protein | DW048_19640 | Not Available | Negative | 4510125 - 4511609 | 56980.8 |
| abc transporter permease | DW048_19645 | Not Available | Negative | 4511763 - 4513007 | 47829.8 |
| multidrug abc transporter substrate-binding protein | DW048_19650 | Not Available | Negative | 4513021 - 4514277 | 47318.6 |
| abc transporter permease | DW048_19660 | Not Available | Negative | 4515574 - 4516854 | 47780.6 |
| abc transporter permease | DW048_19665 | Not Available | Negative | 4516894 - 4518144 | 48071.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

