Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_19555 | Not Available | Negative | 4493428 - 4494216 | 29506.6 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 4494489 - 4494884 | Not Available |
| Tmrna,resume consensus sequence (at 393): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 4494669 - 4495188 | Not Available |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 4495097 - 4495491 | Not Available |
| lactonase family protein | DW048_19570 | Not Available | Positive | 4495632 - 4496798 | 42700.8 |
| mannose-6-phosphate isomerase | DW048_19575 | Not Available | Negative | 4496890 - 4497861 | 36200.5 |
| low specificity l-threonine aldolase | DW048_19585 | Not Available | Positive | 4499383 - 4500399 | 37840.4 |
| hypothetical protein | DW048_19590 | Not Available | Negative | 4500459 - 4500653 | 7020.47 |
| hypothetical protein | DW048_19595 | Not Available | Negative | 4500806 - 4501519 | 27767.8 |
| hypothetical protein | DW048_19605 | Not Available | Negative | 4502973 - 4503350 | 14567.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

