Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_19440 | Not Available | Positive | 4471572 - 4471775 | 7562.53 |
| radical sam protein | DW048_19445 | Not Available | Positive | 4471753 - 4473264 | 58122.2 |
| peptidase c39 | DW048_19450 | Not Available | Positive | 4473257 - 4473838 | 23420.5 |
| hypothetical protein | DW048_19455 | Not Available | Negative | 4473804 - 4474427 | 23147.9 |
| hypothetical protein | DW048_19460 | Not Available | Positive | 4474740 - 4474961 | 8421.99 |
| hypothetical protein | DW048_19465 | Not Available | Positive | 4474958 - 4475179 | 8538.35 |
| metallophosphoesterase | DW048_19475 | Not Available | Positive | 4477316 - 4477813 | 18707.5 |
| dtdp-glucose 4,6-dehydratase | DW048_19480 | Not Available | Positive | 4477862 - 4479001 | 43738.0 |
| glycoside hydrolase family 28 protein | DW048_19485 | Not Available | Positive | 4479374 - 4480780 | 52459.8 |
| gtp-binding protein | DW048_19490 | Not Available | Negative | 4480844 - 4482094 | 47697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

