Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW048_19225 | Not Available | Positive | 4414396 - 4415256 | 33227.9 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DW048_19230 | Not Available | Negative | 4415321 - 4416076 | 27308.1 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DW048_19235 | Not Available | Negative | 4416097 - 4418055 | 72651.5 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DW048_19240 | Not Available | Negative | 4418090 - 4418776 | 25487.5 |
| phosphatase pap2 family protein | DW048_19245 | Not Available | Positive | 4418967 - 4419578 | 22003.9 |
| n-acetyltransferase | DW048_19265 | Not Available | Negative | 4423664 - 4424800 | 43785.1 |
| sodium:calcium antiporter | DW048_19270 | Not Available | Negative | 4424875 - 4425837 | 33528.8 |
| acid phosphatase | DW048_19275 | Not Available | Negative | 4425901 - 4426872 | 37239.9 |
| hypothetical protein | DW048_19290 | Not Available | Negative | 4430583 - 4433510 | 106643.0 |
| arac family transcriptional regulator | DW048_19295 | Not Available | Negative | 4433555 - 4434049 | 19177.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

