Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_19160 | Not Available | Negative | 4403764 - 4403991 | 8602.18 |
| duf3990 domain-containing protein | DW048_19165 | Not Available | Negative | 4403988 - 4404461 | 18414.9 |
| duf3791 domain-containing protein | DW048_19170 | Not Available | Negative | 4404458 - 4404886 | 15954.4 |
| duf2442 domain-containing protein | DW048_19175 | Not Available | Positive | 4405198 - 4405614 | 16026.2 |
| upxy family transcription antiterminator | DW048_19185 | Not Available | Positive | 4406608 - 4407156 | 21158.1 |
| hypothetical protein | DW048_19190 | Not Available | Positive | 4407239 - 4407622 | 14845.0 |
| hypothetical protein | DW048_19200 | Not Available | Positive | 4408255 - 4409622 | 51177.3 |
| duf3575 domain-containing protein | DW048_19210 | Not Available | Positive | 4410536 - 4411903 | 52108.3 |
| duf5119 domain-containing protein | DW048_19215 | Not Available | Positive | 4411870 - 4412865 | 36329.9 |
| fimbrillin family protein | DW048_19220 | Not Available | Positive | 4412914 - 4413897 | 35284.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

