Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | DW048_19090 | Not Available | Positive | 4385271 - 4385533 | 10172.5 |
| hypothetical protein | DW048_19095 | Not Available | Positive | 4385534 - 4385813 | 10376.9 |
| tigr03905 family tscpd domain-containing protein | DW048_19100 | Not Available | Negative | 4385929 - 4386174 | 9080.04 |
| yebc/pmpr family dna-binding transcriptional regulator | DW048_19105 | Not Available | Negative | 4386176 - 4386916 | 27834.7 |
| phenylalanine--trna ligase subunit beta | DW048_19110 | Not Available | Negative | 4386950 - 4389412 | 91165.9 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | DW048_19120 | Not Available | Positive | 4391383 - 4392210 | 30709.1 |
| pd-(d/e)xk nuclease family protein | DW048_19125 | Not Available | Negative | 4392285 - 4395164 | 110971.0 |
| sigma-54-dependent fis family transcriptional regulator | DW048_19140 | Not Available | Negative | 4399835 - 4401175 | 50138.7 |
| aaa family atpase | DW048_19145 | Not Available | Negative | 4401212 - 4402984 | 68913.8 |
| glutathione peroxidase | DW048_19155 | Not Available | Positive | 4403195 - 4403716 | 19530.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

