Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol monophosphatase | DW048_18965 | Not Available | Positive | 4346778 - 4347566 | 29098.5 |
| duf2461 domain-containing protein | DW048_18970 | Not Available | Positive | 4347642 - 4348307 | 25851.7 |
| yhch/yjgk/yial family protein | DW048_18975 | Not Available | Positive | 4348344 - 4348784 | 16248.5 |
| 1,4-alpha-glucan-branching enzyme | DW048_18980 | Not Available | Positive | 4348813 - 4350840 | 78102.2 |
| hypothetical protein | DW048_18985 | Not Available | Positive | 4350844 - 4351995 | 44005.6 |
| proline--trna ligase | DW048_18990 | Not Available | Positive | 4352110 - 4353600 | 56833.0 |
| atp-binding cassette domain-containing protein | DW048_18995 | Not Available | Positive | 4353635 - 4354303 | 24473.8 |
| abc transporter permease | DW048_19000 | Not Available | Positive | 4354312 - 4355109 | 29543.7 |
| hypothetical protein | DW048_19005 | Not Available | Positive | 4355168 - 4355446 | 10839.2 |
| nif3-like dinuclear metal center hexameric protein | DW048_19010 | Not Available | Positive | 4355508 - 4356602 | 40621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

