Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 4308381 - 4308470 | Not Available |
| hypothetical protein | DW048_18780 | Not Available | Negative | 4308449 - 4308640 | 7204.75 |
| transposase | DW048_18790 | Not Available | Negative | 4308966 - 4309138 | 6522.78 |
| susc/raga family tonb-linked outer membrane protein | DW048_18795 | Not Available | Positive | 4309455 - 4312496 | 112156.0 |
| rna polymerase sigma-70 factor | DW048_18805 | Not Available | Positive | 4314444 - 4314953 | 19967.9 |
| fecr family protein | DW048_18810 | Not Available | Positive | 4315023 - 4315826 | 30911.8 |
| tonb-dependent receptor | DW048_18815 | Not Available | Positive | 4315823 - 4318477 | 100776.0 |
| duf4249 domain-containing protein | DW048_18820 | Not Available | Positive | 4318484 - 4319449 | 36343.1 |
| acetyltransferase | DW048_18835 | Not Available | Positive | 4321774 - 4322697 | 37581.7 |
| udp-galactopyranose mutase | DW048_18840 | Not Available | Positive | 4322700 - 4323806 | 42924.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

