Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein trak | DW048_18655 | Not Available | Positive | 4282116 - 4282730 | 23774.9 |
| hypothetical protein | DW048_18660 | Not Available | Positive | 4282966 - 4284135 | 45057.2 |
| dicarboxylate/amino acid:cation symporter | DW048_18665 | Not Available | Negative | 4284340 - 4285518 | 42038.4 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | DW048_18670 | Not Available | Positive | 4285603 - 4287039 | 53128.0 |
| glucose-6-phosphate dehydrogenase | DW048_18675 | Not Available | Positive | 4287088 - 4288596 | 58278.9 |
| 6-phosphogluconolactonase | DW048_18680 | Not Available | Positive | 4288658 - 4289362 | 26387.2 |
| cytochrome d ubiquinol oxidase subunit ii | DW048_18685 | Not Available | Negative | 4289658 - 4290803 | 42798.5 |
| duf4492 domain-containing protein | DW048_18695 | Not Available | Negative | 4292481 - 4292699 | 8685.8 |
| tolc family protein | DW048_18700 | Not Available | Positive | 4292853 - 4294196 | 50244.3 |
| abc transporter atp-binding protein | DW048_18710 | Not Available | Positive | 4295485 - 4296228 | 27239.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

