Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_18525 | Not Available | Negative | 4256968 - 4257477 | 20106.2 |
| transcriptional regulator | DW048_18530 | Not Available | Negative | 4257740 - 4258573 | 32273.7 |
| hypothetical protein | DW048_18535 | Not Available | Negative | 4259053 - 4259274 | 8306.14 |
| site-specific integrase | DW048_18540 | Not Available | Positive | 4259441 - 4260568 | 43033.2 |
| site-specific integrase | DW048_18545 | Not Available | Positive | 4260872 - 4262017 | 44327.6 |
| dna-binding protein | DW048_18560 | Not Available | Positive | 4263361 - 4263810 | 17343.9 |
| dna primase | DW048_18570 | Not Available | Positive | 4264957 - 4265838 | 33280.5 |
| winged helix-turn-helix transcriptional regulator | DW048_18575 | Not Available | Positive | 4265919 - 4267355 | 54428.9 |
| hypothetical protein | DW048_18580 | Not Available | Negative | 4267412 - 4267726 | 12762.8 |
| dna polymerase iii subunit beta | DW048_18585 | Not Available | Negative | 4267803 - 4268936 | 41710.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

