Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_01600 | Not Available | Positive | 334639 - 335151 | 18947.8 |
| hypothetical protein | DW048_01605 | Not Available | Positive | 335225 - 335881 | 25617.3 |
| hypothetical protein | DW048_01615 | Not Available | Positive | 341522 - 342031 | 19068.8 |
| n-acetylmuramoyl-l-alanine amidase | DW048_01625 | Not Available | Positive | 343198 - 348594 | 199487.0 |
| hypothetical protein | DW048_01630 | Not Available | Positive | 348599 - 349084 | 18564.3 |
| hypothetical protein | DW048_01635 | Not Available | Positive | 349179 - 349457 | 10063.3 |
| hypothetical protein | DW048_01640 | Not Available | Positive | 349467 - 350828 | 49713.0 |
| reverse transcriptase | DW048_01645 | Not Available | Positive | 351158 - 352345 | 46646.5 |
| hypothetical protein | DW048_01650 | Not Available | Positive | 352308 - 352736 | 15850.8 |
| hypothetical protein | DW048_01655 | Not Available | Positive | 352733 - 353113 | 14763.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

