Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DW048_18460 | Not Available | Negative | 4241168 - 4242442 | 47720.5 |
| duf4922 domain-containing protein | DW048_18470 | Not Available | Negative | 4243872 - 4246343 | 94486.1 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DW048_18475 | Not Available | Positive | 4246430 - 4247479 | 39554.0 |
| duf4837 family protein | DW048_18480 | Not Available | Positive | 4247505 - 4248569 | 40606.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DW048_18485 | Not Available | Positive | 4248596 - 4249696 | 40647.4 |
| ndp-sugar synthase | DW048_18490 | Not Available | Positive | 4249738 - 4250448 | 26297.6 |
| hypothetical protein | DW048_18495 | Not Available | Positive | 4250468 - 4251319 | 31795.0 |
| cdp-alcohol phosphatidyltransferase family protein | DW048_18500 | Not Available | Positive | 4251327 - 4252277 | 37224.4 |
| upf0104 family protein | DW048_18505 | Not Available | Positive | 4252274 - 4253275 | 37585.2 |
| sugar mfs transporter | DW048_18515 | Not Available | Positive | 4254008 - 4255207 | 44345.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

