Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| simpl domain-containing protein | DW048_18405 | Not Available | Negative | 4233205 - 4233906 | 26282.6 |
| n-acetylmuramic acid 6-phosphate etherase | DW048_18410 | Not Available | Negative | 4233910 - 4234746 | 30411.9 |
| atpase | DW048_18415 | Not Available | Negative | 4234743 - 4235582 | 30756.1 |
| dna-binding response regulator | DW048_18420 | Not Available | Negative | 4235738 - 4236523 | 30198.5 |
| histidine kinase | DW048_18425 | Not Available | Negative | 4236516 - 4237559 | 40167.1 |
| porin family protein | DW048_18430 | Not Available | Negative | 4237676 - 4238314 | 24589.4 |
| duf4136 domain-containing protein | DW048_18435 | Not Available | Negative | 4238327 - 4238959 | 24210.4 |
| duf4251 domain-containing protein | DW048_18440 | Not Available | Negative | 4238985 - 4239542 | 20164.2 |
| duf4251 domain-containing protein | DW048_18445 | Not Available | Negative | 4239776 - 4240330 | 20119.4 |
| hypothetical protein | DW048_18450 | Not Available | Positive | 4240495 - 4240701 | 8036.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

