Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | DW048_18265 | Not Available | Positive | 4195617 - 4197335 | 64187.2 |
| hypothetical protein | DW048_18270 | Not Available | Positive | 4197348 - 4197869 | 20655.1 |
| polysaccharide pyruvyl transferase family protein | DW048_18275 | Not Available | Positive | 4197860 - 4198429 | 22124.9 |
| hypothetical protein | DW048_18280 | Not Available | Positive | 4198470 - 4199060 | 22234.4 |
| glycosyltransferase | DW048_18285 | Not Available | Positive | 4199060 - 4199701 | 24595.4 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_18295 | Not Available | Positive | 4201877 - 4203658 | 68797.7 |
| rna polymerase sigma-70 factor | DW048_18305 | Not Available | Positive | 4207127 - 4207714 | 22807.3 |
| fecr family protein | DW048_18310 | Not Available | Positive | 4207800 - 4208810 | 38489.1 |
| glycoside hydrolase family 95 protein | DW048_18325 | Not Available | Negative | 4213907 - 4216393 | 92761.5 |
| hypothetical protein | DW048_18335 | Not Available | Negative | 4218086 - 4218277 | 7356.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

