Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_18205 | Not Available | Positive | 4184387 - 4184668 | 10653.5 |
| hypothetical protein | DW048_18210 | Not Available | Positive | 4184669 - 4185364 | 27024.8 |
| lipopolysaccharide biosynthesis protein | DW048_18215 | Not Available | Positive | 4185432 - 4186868 | 53749.5 |
| atp-grasp domain-containing protein | DW048_18225 | Not Available | Positive | 4188006 - 4189217 | 45235.6 |
| hypothetical protein | DW048_18230 | Not Available | Positive | 4189214 - 4190167 | 37113.6 |
| sialic acid o-acetyltransferase | DW048_18235 | Not Available | Positive | 4190164 - 4190823 | 23931.9 |
| maoc family dehydratase | DW048_18240 | Not Available | Positive | 4190830 - 4191291 | 17375.0 |
| glycosyltransferase | DW048_18250 | Not Available | Positive | 4192576 - 4193373 | 30818.0 |
| epsg family protein | DW048_18255 | Not Available | Positive | 4193555 - 4194763 | 46943.2 |
| sdr family oxidoreductase | DW048_18260 | Not Available | Positive | 4194774 - 4195595 | 30475.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

