Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_18090 | Not Available | Positive | 4157394 - 4157693 | 11040.1 |
| cpbp family intramembrane metalloprotease | DW048_18095 | Not Available | Positive | 4157866 - 4158696 | 30233.7 |
| duf2975 domain-containing protein | DW048_18105 | Not Available | Positive | 4159350 - 4159997 | 24199.5 |
| hypothetical protein | DW048_18110 | Not Available | Positive | 4160008 - 4160265 | 10128.6 |
| transcriptional regulator | DW048_18115 | Not Available | Positive | 4160269 - 4160481 | 7848.66 |
| atp-dependent rna helicase | DW048_18120 | Not Available | Positive | 4160743 - 4162617 | 70716.0 |
| s46 family peptidase | DW048_18125 | Not Available | Negative | 4162937 - 4165063 | 80008.7 |
| tigr00341 family protein | DW048_18130 | Not Available | Negative | 4165068 - 4166432 | 50535.2 |
| lipopolysaccharide biosynthesis protein | DW048_18135 | Not Available | Negative | 4166435 - 4167880 | 54344.9 |
| holliday junction branch migration dna helicase ruvb | DW048_18140 | Not Available | Negative | 4167884 - 4168912 | 38022.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

