Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_18030 | Not Available | Negative | 4145836 - 4146396 | 20963.8 |
| hypothetical protein | DW048_18035 | Not Available | Negative | 4146448 - 4146795 | 13282.8 |
| duf3853 family protein | DW048_18045 | Not Available | Negative | 4148319 - 4148636 | 11310.9 |
| hypothetical protein | DW048_18050 | Not Available | Negative | 4148815 - 4150059 | 48270.0 |
| integrase | DW048_18055 | Not Available | Negative | 4150077 - 4151543 | 56416.4 |
| Trna-met | Not Available | Not Available | Positive | 4152175 - 4152248 | Not Available |
| calcium-translocating p-type atpase, pmca-type | DW048_18065 | Not Available | Positive | 4152404 - 4155034 | 97124.9 |
| bifunctional riboflavin kinase/fad synthetase | DW048_18075 | Not Available | Positive | 4155675 - 4156595 | 35256.5 |
| hypothetical protein | DW048_18080 | Not Available | Negative | 4156687 - 4156953 | 10459.9 |
| duf3836 domain-containing protein | DW048_18085 | Not Available | Positive | 4156975 - 4157394 | 16015.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

