Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | DW048_17950 | Not Available | Positive | 4133690 - 4134454 | 29423.2 |
| hypothetical protein | DW048_17955 | Not Available | Negative | 4134395 - 4134745 | 13439.4 |
| hypothetical protein | DW048_17965 | Not Available | Negative | 4137077 - 4137415 | 12594.3 |
| duf3784 domain-containing protein | DW048_17970 | Not Available | Negative | 4137720 - 4138037 | 11703.0 |
| hypothetical protein | DW048_17985 | Not Available | Positive | 4138631 - 4138828 | 7665.01 |
| integrase | DW048_18000 | Not Available | Positive | 4140862 - 4141464 | 22628.3 |
| invertase | DW048_18010 | Not Available | Negative | 4142456 - 4143109 | 24602.3 |
| hypothetical protein | DW048_18015 | Not Available | Negative | 4143335 - 4143877 | 20420.7 |
| relaxase | DW048_18020 | Not Available | Negative | 4143902 - 4145113 | 45825.6 |
| hypothetical protein | DW048_18025 | Not Available | Negative | 4145129 - 4145527 | 15384.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

